Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna methylase | SAMEA3472044_04526 | Not Available | Negative | 4492557 - 4493120 | 21067.7 |
| domain of uncharacterised function (duf3560) | SAMEA3472044_04527 | Not Available | Negative | 4493168 - 4494529 | 51754.2 |
| uncharacterised protein | SAMEA3472044_04528 | Not Available | Negative | 4494581 - 4494811 | 8582.57 |
| plasmid protein | SAMEA3472044_04529 | Not Available | Negative | 4495853 - 4496044 | 7264.75 |
| putative dna methylase | SAMEA3472044_04530 | Not Available | Negative | 4496041 - 4496463 | 15587.4 |
| putative antirestriction protein | SAMEA3472044_04531 | Not Available | Negative | 4496510 - 4496935 | 16202.3 |
| ycha | SAMEA3472044_04532 | Not Available | Negative | 4497349 - 4498119 | 28728.4 |
| protein of uncharacterised function (duf1380) | SAMEA3472044_04533 | Not Available | Negative | 4498164 - 4498598 | 16001.0 |
| putative cytoplasmic protein | SAMEA3472044_04534 | Not Available | Negative | 4498612 - 4498833 | 8675.34 |
| dna methylase | SAMEA3472044_04535 | Not Available | Negative | 4498834 - 4499517 | 25540.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





