Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase e | SAMEA3472044_04514 | Not Available | Positive | 4475772 - 4476461 | 24629.7 |
| putative transporter | SAMEA3472044_04515 | Not Available | Negative | 4476551 - 4478182 | 59470.7 |
| b12-dependent methionine synthase | SAMEA3472044_04516 | Not Available | Negative | 4478402 - 4482085 | 136005.0 |
| iclr family transcriptional regulator | SAMEA3472044_04517 | Not Available | Positive | 4482285 - 4483109 | 29741.1 |
| t3ss effector-like protein espl | SAMEA3472044_04518 | Not Available | Positive | 4483426 - 4484784 | 51963.6 |
| isocitrate dehydrogenase kinase/phosphatase | SAMEA3472044_04519 | Not Available | Negative | 4484970 - 4486706 | 67707.3 |
| isocitrate lyase | SAMEA3472044_04520 | Not Available | Negative | 4486987 - 4488291 | 47524.1 |
| malate synthase | SAMEA3472044_04521 | Not Available | Negative | 4488321 - 4489922 | 60276.9 |
| homoserine o-succinyltransferase | SAMEA3472044_04522 | Not Available | Negative | 4490191 - 4491120 | 35715.1 |
| putative acetyltransferase | SAMEA3472044_04523 | Not Available | Positive | 4491277 - 4491720 | 16505.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





