Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose transporter xyle | SAMEA3472044_04502 | Not Available | Positive | 4463646 - 4465121 | 53685.2 |
| protein psie | SAMEA3472044_04503 | Not Available | Negative | 4465165 - 4465575 | 15597.7 |
| putative lipoprotein | SAMEA3472044_04504 | Not Available | Negative | 4466171 - 4468267 | 78495.0 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472044_04505 | Not Available | Negative | 4468267 - 4469004 | 26282.3 |
| lipoprotein yjbf | SAMEA3472044_04506 | Not Available | Negative | 4469001 - 4469639 | 23756.1 |
| protein | SAMEA3472044_04507 | Not Available | Negative | 4469753 - 4469995 | 7386.46 |
| glucosephosphate isomerase | SAMEA3472044_04509 | Not Available | Negative | 4470508 - 4472157 | 61461.0 |
| lysine-sensitive aspartokinase iii | SAMEA3472044_04511 | Not Available | Positive | 4472682 - 4474031 | 48520.6 |
| yjbd family (duf3811) | SAMEA3472044_04512 | Not Available | Positive | 4474283 - 4474555 | 10546.7 |
| ribosomal large subunit pseudouridine synthase f | SAMEA3472044_04513 | Not Available | Negative | 4474688 - 4475560 | 32446.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





