Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2713) | SAMEA3472044_04482 | Not Available | Negative | 4444686 - 4445393 | 26634.2 |
| yjbl | SAMEA3472044_04483 | Not Available | Negative | 4445417 - 4445671 | 9749.9 |
| zinc uptake regulation protein | SAMEA3472044_04484 | Not Available | Positive | 4445989 - 4446504 | 19287.3 |
| putative general stress response protein | SAMEA3472044_04485 | Not Available | Negative | 4446546 - 4446755 | 8325.67 |
| dna-damage-inducible sos response protein | SAMEA3472044_04486 | Not Available | Negative | 4446871 - 4448196 | 47728.0 |
| lexa repressor | SAMEA3472044_04487 | Not Available | Negative | 4448269 - 4448877 | 22359.1 |
| diacylglycerol kinase | SAMEA3472044_04488 | Not Available | Negative | 4448987 - 4449355 | 13245.4 |
| glycerol-3-phosphate acyltransferase | SAMEA3472044_04489 | Not Available | Positive | 4449526 - 4451949 | 91386.9 |
| 4-hydroxybenzoate octaprenyltransferase | SAMEA3472044_04490 | Not Available | Negative | 4452104 - 4452976 | 32513.6 |
| chorismate lyase | SAMEA3472044_04491 | Not Available | Negative | 4452989 - 4453486 | 18836.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





