Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxybenzoic acid efflux pump subunit a | SAMEA3472044_04271 | Not Available | Negative | 4263010 - 4263942 | 34762.5 |
| protein aaex | SAMEA3472044_04272 | Not Available | Negative | 4263950 - 4264153 | 7847.01 |
| lysr family transcriptional regulator | SAMEA3472044_04273 | Not Available | Positive | 4264336 - 4265265 | 34458.0 |
| tldd protein | SAMEA3472044_04274 | Not Available | Negative | 4265399 - 4266844 | 51367.2 |
| membrane protein | SAMEA3472044_04275 | Not Available | Negative | 4267274 - 4271074 | 139076.0 |
| ribonuclease g | SAMEA3472044_04276 | Not Available | Negative | 4271142 - 4272611 | 55367.4 |
| maf-like protein | SAMEA3472044_04277 | Not Available | Negative | 4272601 - 4273194 | 21430.6 |
| rod shape-determining protein | SAMEA3472044_04278 | Not Available | Negative | 4273203 - 4273691 | 18788.9 |
| rod shape-determining protein | SAMEA3472044_04279 | Not Available | Negative | 4273691 - 4274794 | 39532.8 |
| rod shape-determining protein mreb | SAMEA3472044_04280 | Not Available | Negative | 4274860 - 4275903 | 36954.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





