Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | SAMEA3472044_04261 | Not Available | Negative | 4253039 - 4253467 | 16019.5 |
| putative atp/gtp-binding protein | SAMEA3472044_04262 | Not Available | Negative | 4253686 - 4254813 | 43068.1 |
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3472044_04263 | Not Available | Positive | 4255007 - 4255405 | 14976.7 |
| serine endoprotease | SAMEA3472044_04264 | Not Available | Positive | 4255559 - 4256926 | 47207.9 |
| protease | SAMEA3472044_04265 | Not Available | Positive | 4257016 - 4258083 | 37583.4 |
| malate dehydrogenase | SAMEA3472044_04266 | Not Available | Negative | 4258146 - 4259084 | 32366.3 |
| arginine repressor | SAMEA3472044_04267 | Not Available | Positive | 4259519 - 4259989 | 16995.5 |
| protein ycfr | SAMEA3472044_04268 | Not Available | Positive | 4260354 - 4260617 | 9196.89 |
| barnase inhibitor | SAMEA3472044_04269 | Not Available | Negative | 4260673 - 4260945 | 10795.7 |
| p-hydroxybenzoic acid efflux pump subunit b | SAMEA3472044_04270 | Not Available | Negative | 4261037 - 4263004 | 73588.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





