Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SAMEA3472044_04250 | Not Available | Positive | 4241276 - 4242568 | 46781.0 |
| binding-protein-dependent transport system inner membrane protein | SAMEA3472044_04251 | Not Available | Positive | 4242589 - 4242933 | 12999.0 |
| integrase for prophage cp-933o | SAMEA3472044_04252 | Not Available | Negative | 4242979 - 4244109 | 43170.1 |
| exonuclease from phage origin | SAMEA3472044_04253 | Not Available | Negative | 4244400 - 4246481 | 77990.2 |
| n-acetylneuraminate lyase | SAMEA3472044_04255 | Not Available | Negative | 4247499 - 4248392 | 32595.4 |
| gntr family transcriptional regulator | SAMEA3472044_04256 | Not Available | Negative | 4248514 - 4249305 | 29526.0 |
| c4-dicarboxylate transporter | SAMEA3472044_04257 | Not Available | Positive | 4249685 - 4251052 | 48804.9 |
| stringent starvation protein b | SAMEA3472044_04258 | Not Available | Negative | 4251095 - 4251592 | 18263.4 |
| stringent starvation protein a | SAMEA3472044_04259 | Not Available | Negative | 4251598 - 4252236 | 24306.3 |
| 30s ribosomal protein s9 | SAMEA3472044_04260 | Not Available | Negative | 4252631 - 4253023 | 14857.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





