Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3472044_04240 | Not Available | Positive | 4232113 - 4233600 | 53372.4 |
| gamma-glutamylputrescine oxidoreductase | SAMEA3472044_04241 | Not Available | Positive | 4233602 - 4234882 | 47172.3 |
| 4-aminobutyrate aminotransferase | SAMEA3472044_04242 | Not Available | Positive | 4234920 - 4236185 | 44720.7 |
| phage shock protein operon transcriptional activator | SAMEA3472044_04243 | Not Available | Negative | 4236303 - 4237280 | 36962.6 |
| phage shock protein a | SAMEA3472044_04244 | Not Available | Positive | 4237447 - 4238115 | 25494.4 |
| phage shock protein b | SAMEA3472044_04245 | Not Available | Positive | 4238169 - 4238393 | 8763.59 |
| phage shock protein c | SAMEA3472044_04246 | Not Available | Positive | 4238393 - 4238752 | 13517.7 |
| peripheral inner membrane phage-shock protein | SAMEA3472044_04247 | Not Available | Positive | 4238761 - 4238982 | 8042.22 |
| phage shock protein e (rhodanase-like protein) | SAMEA3472044_04248 | Not Available | Positive | 4239057 - 4239371 | 11495.0 |
| sucrose phosphorylase | SAMEA3472044_04249 | Not Available | Positive | 4239583 - 4241262 | 64230.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





