Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SAMEA3472044_04220 | Not Available | Positive | 4209930 - 4211099 | 44517.6 |
| orotidine 5'-phosphate decarboxylase | SAMEA3472044_04221 | Not Available | Positive | 4211232 - 4212029 | 28460.3 |
| translation initiation factor sui1 | SAMEA3472044_04222 | Not Available | Positive | 4212029 - 4212355 | 11411.0 |
| osmotically inducible lipoprotein b | SAMEA3472044_04223 | Not Available | Negative | 4212481 - 4212699 | 6948.51 |
| deor-family transcriptional regulator | SAMEA3472044_04224 | Not Available | Negative | 4212968 - 4213717 | 27590.2 |
| uncharacterised protein | SAMEA3472044_04225 | Not Available | Negative | 4213807 - 4213980 | 6441.71 |
| putative signal transduction protein | SAMEA3472044_04226 | Not Available | Negative | 4214128 - 4216113 | 74698.3 |
| exoribonuclease ii | SAMEA3472044_04227 | Not Available | Negative | 4216348 - 4218282 | 72512.9 |
| oxidoreductase | SAMEA3472044_04228 | Not Available | Negative | 4218350 - 4219477 | 42163.0 |
| enoyl-(acyl carrier protein) reductase | SAMEA3472044_04229 | Not Available | Negative | 4219621 - 4220409 | 27895.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





