Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase | SAMEA3472044_04198 | Not Available | Negative | 4186599 - 4187792 | 42959.6 |
| tryptophan biosynthesis protein | SAMEA3472044_04199 | Not Available | Negative | 4187804 - 4189162 | 49311.9 |
| anthranilate synthase component ii | SAMEA3472044_04200 | Not Available | Negative | 4189166 - 4190761 | 56859.3 |
| anthranilate synthase component i | SAMEA3472044_04201 | Not Available | Negative | 4190761 - 4192323 | 57544.8 |
| putative phosphoesterase | SAMEA3472044_04203 | Not Available | Positive | 4192597 - 4193478 | 32611.8 |
| putative rna binding protein | SAMEA3472044_04204 | Not Available | Positive | 4193475 - 4194095 | 23199.1 |
| putative inner membrane protein | SAMEA3472044_04205 | Not Available | Positive | 4194123 - 4196018 | 71289.2 |
| 23s rrna pseudouridylate synthase b | SAMEA3472044_04206 | Not Available | Positive | 4196229 - 4197044 | 30693.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3472044_04207 | Not Available | Negative | 4197140 - 4197730 | 22000.2 |
| putative short chain dehydrogenase | SAMEA3472044_04208 | Not Available | Negative | 4197727 - 4198485 | 27934.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





