Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | SAMEA3472044_04188 | Not Available | Negative | 4179818 - 4180375 | 20919.0 |
| transport protein tonb | SAMEA3472044_04189 | Not Available | Positive | 4180430 - 4181185 | 27392.2 |
| putative acyl-coa thioester hydrolase | SAMEA3472044_04190 | Not Available | Negative | 4181225 - 4181623 | 14231.4 |
| putative intracellular septation protein | SAMEA3472044_04191 | Not Available | Negative | 4181728 - 4182267 | 20791.3 |
| membrane protein ycic | SAMEA3472044_04192 | Not Available | Negative | 4182297 - 4183040 | 26420.6 |
| outer membrane protein w | SAMEA3472044_04193 | Not Available | Positive | 4183397 - 4184035 | 22929.1 |
| protein ycie | SAMEA3472044_04194 | Not Available | Negative | 4184095 - 4184601 | 18997.6 |
| ycif protein | SAMEA3472044_04195 | Not Available | Negative | 4184647 - 4185147 | 18598.2 |
| protein | SAMEA3472044_04196 | Not Available | Negative | 4185233 - 4185412 | 6002.69 |
| tryptophan synthase alpha chain | SAMEA3472044_04197 | Not Available | Negative | 4185793 - 4186599 | 28729.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





