Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | SAMEA3472044_04178 | Not Available | Negative | 4169526 - 4171955 | 89147.2 |
| 2'-5' rna ligase | SAMEA3472044_04179 | Not Available | Positive | 4172029 - 4172559 | 19935.0 |
| sugar fermentation stimulation protein | SAMEA3472044_04180 | Not Available | Positive | 4172574 - 4173278 | 26230.2 |
| rna polymerase-binding transcription factor | SAMEA3472044_04181 | Not Available | Positive | 4173456 - 4173911 | 17528.7 |
| glutamyl-q trna(asp) synthetase | SAMEA3472044_04182 | Not Available | Positive | 4173948 - 4174874 | 34886.6 |
| poly(a) polymerase | SAMEA3472044_04183 | Not Available | Positive | 4174967 - 4176331 | 52551.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase | SAMEA3472044_04184 | Not Available | Positive | 4176328 - 4176807 | 17936.6 |
| fimbrial protein | SAMEA3472044_04185 | Not Available | Positive | 4177156 - 4177749 | 20451.1 |
| putative chaperone protein ecpd | SAMEA3472044_04186 | Not Available | Positive | 4177832 - 4178557 | 26410.5 |
| putative outer membrane usher protein | SAMEA3472044_04187 | Not Available | Positive | 4178598 - 4179608 | 36928.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





