Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein | SAMEA3472044_04147 | Not Available | Negative | 4133216 - 4133701 | 17689.2 |
| outer membrane protein assembly factor | SAMEA3472044_04148 | Not Available | Negative | 4133823 - 4136255 | 90557.5 |
| zinc metallopeptidase rsep | SAMEA3472044_04149 | Not Available | Negative | 4136285 - 4137637 | 49074.2 |
| cdp-diglyceride synthase | SAMEA3472044_04150 | Not Available | Negative | 4137649 - 4138398 | 27572.3 |
| uncharacterised protein | SAMEA3472044_04151 | Not Available | Negative | 4138367 - 4138519 | 4984.03 |
| undecaprenyl pyrophosphate synthetase | SAMEA3472044_04152 | Not Available | Negative | 4138519 - 4139277 | 28314.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA3472044_04153 | Not Available | Negative | 4139466 - 4140662 | 43390.5 |
| ribosome recycling factor | SAMEA3472044_04154 | Not Available | Negative | 4140754 - 4141311 | 20639.7 |
| uridylate kinase | SAMEA3472044_04155 | Not Available | Negative | 4141603 - 4142328 | 25971.9 |
| elongation factor ts | SAMEA3472044_04156 | Not Available | Negative | 4142475 - 4143326 | 30424.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





