Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472044_04066 | Not Available | Negative | 4054633 - 4054740 | 3827.66 |
| succinate dehydrogenase cytochrome b556 large membrane subunit | SAMEA3472044_04067 | Not Available | Positive | 4055121 - 4055525 | 14948.9 |
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3472044_04068 | Not Available | Positive | 4055519 - 4055866 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | SAMEA3472044_04069 | Not Available | Positive | 4055866 - 4057632 | 64425.6 |
| succinate dehydrogenase | SAMEA3472044_04070 | Not Available | Positive | 4057648 - 4058364 | 26758.4 |
| 2-oxoglutarate dehydrogenase e1 component | SAMEA3472044_04071 | Not Available | Positive | 4058666 - 4061467 | 105068.0 |
| dihydrolipoamide succinyltransferase component (e2) | SAMEA3472044_04072 | Not Available | Positive | 4061482 - 4062699 | 44014.0 |
| succinyl-coa synthetase beta chain with atp-grasp domain | SAMEA3472044_04073 | Not Available | Positive | 4062793 - 4063959 | 41395.1 |
| succinyl-coa ligase subunit alpha | SAMEA3472044_04074 | Not Available | Positive | 4063959 - 4064828 | 29778.3 |
| dna-binding transcriptional repressor mngr | SAMEA3472044_04075 | Not Available | Negative | 4064932 - 4065654 | 28248.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





