Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative allophanate hydrolase subunit 1 | SAMEA3472044_04056 | Not Available | Positive | 4043546 - 4044202 | 23948.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3472044_04057 | Not Available | Positive | 4044196 - 4045128 | 34464.5 |
| lamb/ycsf-family protein | SAMEA3472044_04058 | Not Available | Positive | 4045118 - 4045852 | 25932.0 |
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3472044_04059 | Not Available | Positive | 4045888 - 4046679 | 29867.8 |
| transport protein abrb | SAMEA3472044_04060 | Not Available | Negative | 4046676 - 4047722 | 36886.1 |
| putative fimbrial protein | SAMEA3472044_04061 | Not Available | Negative | 4047874 - 4048935 | 39595.7 |
| chaperone, papd family | SAMEA3472044_04062 | Not Available | Negative | 4048932 - 4049663 | 27209.9 |
| outer membrane protein | SAMEA3472044_04063 | Not Available | Negative | 4049852 - 4052128 | 83976.3 |
| putative fimbrial-like adhesin protein | SAMEA3472044_04064 | Not Available | Negative | 4052188 - 4052754 | 19899.2 |
| citrate synthase | SAMEA3472044_04065 | Not Available | Negative | 4053144 - 4054427 | 48017.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





