Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | SAMEA3472044_03967 | Not Available | Negative | 3971786 - 3972034 | 9191.08 |
| parb family protein | SAMEA3472044_04046 | Not Available | Positive | 4032167 - 4033063 | 33992.5 |
| ybl116 | SAMEA3472044_04047 | Not Available | Positive | 4033060 - 4033956 | 33838.4 |
| rhs repeat family protein | SAMEA3472044_04049 | Not Available | Positive | 4037158 - 4037955 | 30565.7 |
| uncharacterised protein | SAMEA3472044_04050 | Not Available | Positive | 4038051 - 4038485 | 16653.6 |
| endoribonuclease syme | SAMEA3472044_04051 | Not Available | Negative | 4038532 - 4038825 | 10954.3 |
| photoreactivation-associated protein | SAMEA3472044_04052 | Not Available | Positive | 4038954 - 4039463 | 20208.2 |
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3472044_04053 | Not Available | Positive | 4039460 - 4040878 | 53687.9 |
| putative oligopeptide transporter | SAMEA3472044_04054 | Not Available | Negative | 4041028 - 4042509 | 54148.1 |
| hydrolase-oxidase | SAMEA3472044_04055 | Not Available | Positive | 4042780 - 4043523 | 26926.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





