Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | SAMEA3472044_03945 | Not Available | Positive | 3950568 - 3951860 | 49287.0 |
| putative sodium/hydrogen exchanger | SAMEA3472044_03946 | Not Available | Negative | 3952014 - 3953663 | 60527.5 |
| putative xanthine/uracil permeases family protein yjcd | SAMEA3472044_03947 | Not Available | Negative | 3953815 - 3955164 | 45714.4 |
| arac family transcriptional regulator | SAMEA3472044_03949 | Not Available | Positive | 3956260 - 3956583 | 12911.6 |
| putative eal domain-containing protein | SAMEA3472044_03950 | Not Available | Negative | 3956586 - 3956963 | 14408.3 |
| protein disaggregation chaperone | SAMEA3472044_03951 | Not Available | Negative | 3957448 - 3960021 | 95590.8 |
| putative inner membrane protein | SAMEA3472044_03952 | Not Available | Negative | 3960151 - 3960882 | 26379.5 |
| 23s rrna pseudouridine synthase | SAMEA3472044_03953 | Not Available | Negative | 3960879 - 3961859 | 37109.8 |
| outer membrane protein assembly complex subunit yfio | SAMEA3472044_03954 | Not Available | Positive | 3961994 - 3962731 | 27830.9 |
| translation inhibitor protein raia | SAMEA3472044_03955 | Not Available | Positive | 3963002 - 3963343 | 12785.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





