Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator basr | SAMEA3472044_03903 | Not Available | Positive | 3906805 - 3907473 | 25002.3 |
| proline/glycine betaine transporter | SAMEA3472044_03905 | Not Available | Negative | 3908751 - 3910253 | 54863.1 |
| mutational suppressor of yhjh motility mutation, function uncharacterised | SAMEA3472044_03906 | Not Available | Negative | 3910517 - 3911395 | 32955.8 |
| putative vimentin | SAMEA3472044_03907 | Not Available | Negative | 3911392 - 3913620 | 84208.6 |
| alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3472044_03908 | Not Available | Positive | 3914022 - 3914357 | 12345.7 |
| phnb protein | SAMEA3472044_03909 | Not Available | Positive | 3914717 - 3915160 | 16172.2 |
| phosphonate abc transporter atpase | SAMEA3472044_03910 | Not Available | Positive | 3915293 - 3916081 | 29475.4 |
| phosphonate abc transporter, substrate-binding protein | SAMEA3472044_03911 | Not Available | Positive | 3916106 - 3917122 | 37372.6 |
| phosphonates transport system, permease protein | SAMEA3472044_03912 | Not Available | Positive | 3917228 - 3918007 | 28385.3 |
| phosphonate metabolism transcriptional regulator phnf | SAMEA3472044_03913 | Not Available | Positive | 3918028 - 3918753 | 27623.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





