Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter dcub | SAMEA3472044_03893 | Not Available | Positive | 3892010 - 3893350 | 47938.2 |
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | SAMEA3472044_03894 | Not Available | Positive | 3893428 - 3895074 | 60108.7 |
| putative inner membrane protein | SAMEA3472044_03895 | Not Available | Positive | 3895197 - 3895826 | 23358.3 |
| melibiose:sodium symporter | SAMEA3472044_03896 | Not Available | Negative | 3895965 - 3897374 | 52238.9 |
| alpha-galactosidase | SAMEA3472044_03897 | Not Available | Negative | 3897489 - 3898844 | 50659.9 |
| melibiose operon regulatory protein | SAMEA3472044_03898 | Not Available | Positive | 3899127 - 3900035 | 34911.9 |
| biodegradative arginine decarboxylase | SAMEA3472044_03899 | Not Available | Positive | 3900231 - 3902501 | 84561.0 |
| arac family transcriptional regulator | SAMEA3472044_03900 | Not Available | Positive | 3902826 - 3903587 | 29008.3 |
| arginine/agmatine antiporter | SAMEA3472044_03901 | Not Available | Positive | 3903724 - 3905061 | 46845.3 |
| cell division protein | SAMEA3472044_03902 | Not Available | Positive | 3905165 - 3906808 | 61669.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





