Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein dnaj | SAMEA3472044_03790 | Not Available | Positive | 3787947 - 3789077 | 41046.7 |
| protoporphyrinogen oxidase | SAMEA3472044_03791 | Not Available | Negative | 3789429 - 3789974 | 21257.5 |
| trk system potassium uptake protein trkh | SAMEA3472044_03792 | Not Available | Negative | 3789986 - 3791437 | 52962.9 |
| elongation factor | SAMEA3472044_03793 | Not Available | Negative | 3791476 - 3792090 | 21758.1 |
| xaa-pro dipeptidase | SAMEA3472044_03794 | Not Available | Negative | 3792090 - 3793421 | 50088.8 |
| multifunctional fatty acid oxidation complex subunit alpha | SAMEA3472044_03795 | Not Available | Positive | 3793611 - 3795800 | 79597.5 |
| 3-ketoacyl-coa thiolase (fatty oxidation complex beta subunit) | SAMEA3472044_03796 | Not Available | Positive | 3795810 - 3796973 | 40861.7 |
| fmn reductase | SAMEA3472044_03797 | Not Available | Negative | 3797256 - 3797957 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3472044_03798 | Not Available | Negative | 3798003 - 3799496 | 55620.8 |
| transcriptional activator | SAMEA3472044_03799 | Not Available | Positive | 3799663 - 3800151 | 18341.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





