Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trax | SAMEA3472044_03677 | Not Available | Negative | 3668607 - 3668786 | 6788.39 |
| conjugal transfer protein traw | SAMEA3472044_03678 | Not Available | Negative | 3668815 - 3670017 | 42857.0 |
| putative recombinase | SAMEA3472044_03679 | Not Available | Positive | 3671341 - 3671769 | 14581.5 |
| putative transposase | SAMEA3472044_03680 | Not Available | Negative | 3671912 - 3672709 | 30530.3 |
| is21 family transposase | SAMEA3472044_03681 | Not Available | Negative | 3672709 - 3673881 | 45855.9 |
| uncharacterised protein | SAMEA3472044_03682 | Not Available | Positive | 3673922 - 3674170 | 8673.45 |
| protein trau | SAMEA3472044_03683 | Not Available | Negative | 3674181 - 3677225 | 114122.0 |
| trat transfer protein | SAMEA3472044_03684 | Not Available | Negative | 3677315 - 3678115 | 30720.7 |
| tras transfer protein | SAMEA3472044_03685 | Not Available | Negative | 3678099 - 3678287 | 7057.09 |
| trar | SAMEA3472044_03686 | Not Available | Negative | 3678351 - 3678755 | 14104.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





