Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilm protein | SAMEA3472044_03667 | Not Available | Positive | 3658606 - 3659043 | 15718.0 |
| type ivb pilus formation outer membrane protein, r64 piln family | SAMEA3472044_03668 | Not Available | Positive | 3659057 - 3660739 | 59854.8 |
| pilo protein | SAMEA3472044_03669 | Not Available | Positive | 3660732 - 3662027 | 48105.7 |
| type iv pilus biogenesis protein pilp | SAMEA3472044_03670 | Not Available | Positive | 3662014 - 3662466 | 16019.2 |
| type ii secretion system protein e | SAMEA3472044_03671 | Not Available | Positive | 3662477 - 3664030 | 58286.3 |
| pilr protein | SAMEA3472044_03672 | Not Available | Positive | 3664043 - 3665140 | 41419.4 |
| type iv prepilin pils | SAMEA3472044_03673 | Not Available | Positive | 3665158 - 3665772 | 21214.2 |
| lytic transglycosylase | SAMEA3472044_03674 | Not Available | Positive | 3665782 - 3666342 | 20760.4 |
| inci1 conjugal transfer prepilin peptidase pilu | SAMEA3472044_03675 | Not Available | Positive | 3666327 - 3666983 | 24602.8 |
| shufflon protein a | SAMEA3472044_03676 | Not Available | Positive | 3666983 - 3668353 | 48622.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





