Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472044_03625 | Not Available | Negative | 3622117 - 3623247 | 43520.0 |
| predicted nucleotide-binding protein containing tir-like domain | SAMEA3472044_03626 | Not Available | Negative | 3623277 - 3624380 | 40726.9 |
| uncharacterised protein | SAMEA3472044_03627 | Not Available | Positive | 3624709 - 3624951 | 9118.07 |
| transposase tnpa, tn21 | SAMEA3472044_03628 | Not Available | Negative | 3624920 - 3627886 | 111093.0 |
| transposon tn21 resolvase | SAMEA3472044_03629 | Not Available | Negative | 3627889 - 3628449 | 21330.6 |
| modulator protein | SAMEA3472044_03630 | Not Available | Negative | 3628575 - 3628775 | 7066.12 |
| class 1 integron integrase protein inti1 | SAMEA3472044_03631 | Not Available | Negative | 3629128 - 3630141 | 38324.3 |
| dihydrofolate reductase | SAMEA3472044_03632 | Not Available | Positive | 3630286 - 3630783 | 18127.9 |
| aminoglycoside resistance protein aada | SAMEA3472044_03633 | Not Available | Positive | 3631203 - 3631982 | 29124.9 |
| chloramphenicol resistance protein cmla1 | SAMEA3472044_03634 | Not Available | Positive | 3632244 - 3633503 | 44318.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





