Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472044_03605 | Not Available | Negative | 3608306 - 3608527 | 8577.28 |
| dna methylase | SAMEA3472044_03606 | Not Available | Negative | 3608528 - 3609211 | 25537.6 |
| yfda | SAMEA3472044_03607 | Not Available | Negative | 3609595 - 3610521 | 35013.0 |
| dini family protein | SAMEA3472044_03608 | Not Available | Positive | 3610915 - 3611163 | 9502.3 |
| peptidase s24/s26a/s26b | SAMEA3472044_03609 | Not Available | Positive | 3611160 - 3611597 | 16220.1 |
| dna-directed dna polymerase | SAMEA3472044_03610 | Not Available | Positive | 3611597 - 3612868 | 47539.3 |
| stable plasmid inheritance protein | SAMEA3472044_03611 | Not Available | Negative | 3612873 - 3613265 | 14632.6 |
| plasmid stability protein | SAMEA3472044_03612 | Not Available | Negative | 3613270 - 3614241 | 35688.6 |
| plasmid partitioning protein para | SAMEA3472044_03613 | Not Available | Positive | 3614470 - 3615114 | 23546.2 |
| uncharacterised protein | SAMEA3472044_03614 | Not Available | Positive | 3615108 - 3615383 | 10060.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





