Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472044_03593 | Not Available | Negative | 3602271 - 3602720 | 15856.1 |
| acetyltransferase ynca | SAMEA3472044_03594 | Not Available | Negative | 3602717 - 3603235 | 19249.7 |
| putative zinc-binding dehydrogenase | SAMEA3472044_03595 | Not Available | Positive | 3603413 - 3604450 | 37617.1 |
| gntr family transcriptional regulator | SAMEA3472044_03596 | Not Available | Positive | 3604648 - 3605142 | 18347.5 |
| plasmid protein | SAMEA3472044_03599 | Not Available | Negative | 3605542 - 3605733 | 7236.73 |
| ycja | SAMEA3472044_03600 | Not Available | Negative | 3605730 - 3606152 | 15638.5 |
| putative antirestriction protein | SAMEA3472044_03601 | Not Available | Negative | 3606199 - 3606624 | 16312.4 |
| putative antirestriction protein | SAMEA3472044_03602 | Not Available | Negative | 3606590 - 3607036 | 16327.2 |
| ycha | SAMEA3472044_03603 | Not Available | Negative | 3607036 - 3607812 | 28873.8 |
| protein of uncharacterised function (duf1380) | SAMEA3472044_03604 | Not Available | Negative | 3607858 - 3608292 | 16182.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





