Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | SAMEA3472044_03573 | Not Available | Negative | 3583074 - 3584561 | 56658.3 |
| flagellar protein flit | SAMEA3472044_03574 | Not Available | Negative | 3584639 - 3585004 | 13829.6 |
| flagellar protein flis | SAMEA3472044_03575 | Not Available | Negative | 3585004 - 3585414 | 15020.1 |
| flagellar capping protein | SAMEA3472044_03576 | Not Available | Negative | 3585439 - 3586887 | 50122.0 |
| putative transposase b, is609 | SAMEA3472044_03577 | Not Available | Positive | 3587541 - 3587930 | 14077.8 |
| putative benzoate transporter | SAMEA3472044_03578 | Not Available | Negative | 3587970 - 3589145 | 40502.7 |
| putative transcriptional regulator | SAMEA3472044_03579 | Not Available | Positive | 3589237 - 3589773 | 19686.3 |
| putative peptidase | SAMEA3472044_03580 | Not Available | Positive | 3589846 - 3591807 | 72792.1 |
| protein | SAMEA3472044_03581 | Not Available | Negative | 3591899 - 3592069 | 6584.56 |
| toxin of the hica-hicb toxin-antitoxin system | SAMEA3472044_03582 | Not Available | Positive | 3592351 - 3592527 | 6782.3 |
Pathways
1329 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





