Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2525) | SAMEA3472044_03533 | Not Available | Negative | 3549875 - 3550102 | 8593.69 |
| dsrb protein | SAMEA3472044_03534 | Not Available | Positive | 3550265 - 3550453 | 6946.22 |
| colanic acid capsullar biosynthesis activation protein a | SAMEA3472044_03535 | Not Available | Negative | 3550497 - 3551120 | 23483.8 |
| flagellar biosynthesis protein flir | SAMEA3472044_03536 | Not Available | Negative | 3551410 - 3552195 | 28507.3 |
| flagellar biosynthesis protein fliq | SAMEA3472044_03537 | Not Available | Negative | 3552204 - 3552473 | 9632.54 |
| flagellar biosynthetic protein flip | SAMEA3472044_03538 | Not Available | Negative | 3552483 - 3553220 | 26916.1 |
| flagellar biosynthesis protein flio | SAMEA3472044_03539 | Not Available | Negative | 3553220 - 3553585 | 12670.6 |
| flagellar motor switch protein flin | SAMEA3472044_03540 | Not Available | Negative | 3553588 - 3554001 | 14811.7 |
| flagellar motor switch protein flim | SAMEA3472044_03541 | Not Available | Negative | 3553998 - 3555002 | 37864.5 |
| flagellar protein flil | SAMEA3472044_03542 | Not Available | Negative | 3555007 - 3555471 | 17221.8 |
Pathways
342 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





