Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein | SAMEA3472044_03521 | Not Available | Negative | 3538410 - 3539261 | 31131.1 |
| porin ompn | SAMEA3472044_03522 | Not Available | Negative | 3539853 - 3541046 | 42968.9 |
| putative phosphohydrolase | SAMEA3472044_03524 | Not Available | Positive | 3542009 - 3542704 | 25996.8 |
| dna-cytosine methyltransferase | SAMEA3472044_03525 | Not Available | Positive | 3542771 - 3544189 | 53463.7 |
| patch repair protein | SAMEA3472044_03526 | Not Available | Positive | 3544170 - 3544640 | 17904.5 |
| putative dmt superfamily transporter inner membrane protein | SAMEA3472044_03527 | Not Available | Negative | 3544629 - 3545549 | 32196.0 |
| putative methyl-independent mismatch repair protein | SAMEA3472044_03528 | Not Available | Positive | 3545722 - 3546639 | 32134.7 |
| putative small protein | SAMEA3472044_03529 | Not Available | Positive | 3546718 - 3546900 | 6678.85 |
| cellulose synthesis regulatory protein (signal transduction protein) | SAMEA3472044_03530 | Not Available | Positive | 3547071 - 3548765 | 64284.5 |
| mannosyl-3-phosphoglycerate phosphatase | SAMEA3472044_03531 | Not Available | Negative | 3548762 - 3549577 | 30328.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





