Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of avirulence locus involved in temperature-dependent protein secretion | SAMEA3472044_03168 | Not Available | Negative | 3228346 - 3229176 | 30468.1 |
| uncharacterised protein | SAMEA3472044_03169 | Not Available | Negative | 3229252 - 3230076 | 30841.2 |
| chaperone clpb | SAMEA3472044_03170 | Not Available | Positive | 3230409 - 3233036 | 95964.5 |
| uncharacterised protein | SAMEA3472044_03171 | Not Available | Positive | 3233049 - 3233612 | 20089.8 |
| uncharacterised protein | SAMEA3472044_03172 | Not Available | Positive | 3233615 - 3233905 | 11259.8 |
| putative type vi secretion protein | SAMEA3472044_03173 | Not Available | Positive | 3233967 - 3234512 | 19895.9 |
| putative type vi secretion protein | SAMEA3472044_03174 | Not Available | Positive | 3234537 - 3235838 | 48625.4 |
| putative type vi secretion protein | SAMEA3472044_03175 | Not Available | Positive | 3235835 - 3236050 | 7821.24 |
| uncharacterised protein | SAMEA3472044_03176 | Not Available | Positive | 3236103 - 3236588 | 17488.9 |
| uncharacterised protein | SAMEA3472044_03177 | Not Available | Positive | 3236585 - 3236956 | 14124.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





