Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein | SAMEA3472044_03030 | Not Available | Negative | 3100272 - 3101228 | 35751.8 |
| sigma-e factor negative regulator | SAMEA3472044_03031 | Not Available | Negative | 3101228 - 3101878 | 24322.8 |
| rna polymerase sigma factor rpoe | SAMEA3472044_03032 | Not Available | Negative | 3101911 - 3102486 | 21697.0 |
| l-aspartate oxidase | SAMEA3472044_03033 | Not Available | Positive | 3102894 - 3104516 | 60354.9 |
| trna (adenine-n(6)-)-methyltransferase | SAMEA3472044_03034 | Not Available | Negative | 3104501 - 3105238 | 27271.4 |
| atp-dependent rna helicase | SAMEA3472044_03035 | Not Available | Positive | 3105370 - 3106704 | 49901.0 |
| transcriptional regulator yfie | SAMEA3472044_03036 | Not Available | Negative | 3106913 - 3107794 | 33261.1 |
| putative transporter | SAMEA3472044_03037 | Not Available | Positive | 3107897 - 3108484 | 21249.5 |
| autonomous glycyl radical cofactor | SAMEA3472044_03038 | Not Available | Negative | 3108540 - 3108923 | 14285.0 |
| uracil-dna glycosylase | SAMEA3472044_03039 | Not Available | Positive | 3109228 - 3109917 | 25687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





