Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase 2 yadf | SAMEA3472044_01992 | Not Available | Negative | 2034130 - 2034792 | 25098.2 |
| abc transporter atp-binding protein | SAMEA3472044_01993 | Not Available | Positive | 2034901 - 2035827 | 34664.2 |
| inner membrane transport permease yadh | SAMEA3472044_01994 | Not Available | Positive | 2035824 - 2036594 | 28491.8 |
| pts system transporter subunit iia | SAMEA3472044_01995 | Not Available | Positive | 2036699 - 2037139 | 16527.0 |
| putative polysaccharide deacetylase | SAMEA3472044_01996 | Not Available | Positive | 2037203 - 2038432 | 46375.8 |
| aspartate l-decarboxylase | SAMEA3472044_01997 | Not Available | Negative | 2038436 - 2038816 | 13834.5 |
| transposase yhga family protein | SAMEA3472044_01998 | Not Available | Positive | 2039090 - 2039992 | 34608.9 |
| pantoate--beta-alanine ligase | SAMEA3472044_01999 | Not Available | Negative | 2040066 - 2040917 | 31627.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA3472044_02000 | Not Available | Negative | 2040929 - 2041723 | 28297.2 |
| fimbrial protein | SAMEA3472044_02001 | Not Available | Negative | 2041857 - 2042969 | 40531.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





