Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | SAMEA3472044_01927 | Not Available | Negative | 1957981 - 1958676 | 25534.4 |
| l-arabinose isomerase | SAMEA3472044_01928 | Not Available | Negative | 1958961 - 1960463 | 56122.2 |
| ribulokinase | SAMEA3472044_01929 | Not Available | Negative | 1960474 - 1962174 | 61029.6 |
| dna-binding transcriptional regulator arac | SAMEA3472044_01930 | Not Available | Positive | 1962513 - 1963391 | 33385.8 |
| deda family integral membrane protein | SAMEA3472044_01931 | Not Available | Positive | 1963477 - 1964241 | 28185.8 |
| thiamine transporter atp-binding subunit | SAMEA3472044_01932 | Not Available | Negative | 1964355 - 1965053 | 25056.7 |
| thiamine abc transport system, permease protein | SAMEA3472044_01933 | Not Available | Negative | 1965037 - 1966647 | 59361.6 |
| thiamine transporter substrate binding subunit | SAMEA3472044_01934 | Not Available | Negative | 1966623 - 1967606 | 36238.3 |
| putative substrate-binding protein | SAMEA3472044_01936 | Not Available | Negative | 1967770 - 1969425 | 64005.8 |
| broad specificity sugar efflux system | SAMEA3472044_01938 | Not Available | Positive | 1969747 - 1970925 | 42700.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





