Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p pilus assembly protein, pilin fima | SAMEA3472044_01387 | Not Available | Positive | 1418880 - 1419383 | 17385.4 |
| fimh protein | SAMEA3472044_01388 | Not Available | Positive | 1419403 - 1420305 | 31447.1 |
| high-affinity gluconate transporter | SAMEA3472044_01389 | Not Available | Negative | 1420548 - 1421891 | 47185.0 |
| mannonate dehydratase | SAMEA3472044_01390 | Not Available | Positive | 1422231 - 1423415 | 44796.5 |
| d-mannonate oxidoreductase, nad-binding | SAMEA3472044_01391 | Not Available | Positive | 1423496 - 1424956 | 53615.3 |
| uncharacterised protein | SAMEA3472044_01392 | Not Available | Negative | 1424978 - 1425172 | 6777.36 |
| uxu operon transcriptional regulator | SAMEA3472044_01393 | Not Available | Positive | 1425219 - 1425944 | 27612.9 |
| protein of uncharacterised function (duf2686) | SAMEA3472044_01394 | Not Available | Negative | 1426085 - 1426915 | 30594.6 |
| uncharacterised protein | SAMEA3472044_01395 | Not Available | Positive | 1427169 - 1427270 | 3949.04 |
| dna replication/recombination/repair protein | SAMEA3472044_01396 | Not Available | Positive | 1427588 - 1427980 | 14772.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





