Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, atp-binding protein | SAMEA3472044_00989 | Not Available | Negative | 1029567 - 1030331 | 26822.1 |
| nickel abc transporter, permease protein | SAMEA3472044_00990 | Not Available | Negative | 1030331 - 1031164 | 30363.8 |
| nickel abc-transporter, permease protein | SAMEA3472044_00991 | Not Available | Negative | 1031161 - 1032105 | 35250.3 |
| nickel abc transporter, substrate-binding protein | SAMEA3472044_00992 | Not Available | Negative | 1032105 - 1033679 | 58791.3 |
| 4'-phosphopantetheinyl transferase | SAMEA3472044_00993 | Not Available | Negative | 1033790 - 1034377 | 21769.0 |
| inner membrane protein | SAMEA3472044_00994 | Not Available | Negative | 1034432 - 1035481 | 38553.8 |
| major facilitator superfamily protein | SAMEA3472044_00995 | Not Available | Positive | 1035571 - 1036830 | 43812.6 |
| periplasmic protein dcrb | SAMEA3472044_00996 | Not Available | Negative | 1036834 - 1037391 | 19788.7 |
| inner membrane protein | SAMEA3472044_00997 | Not Available | Negative | 1037464 - 1038129 | 25270.3 |
| sulfurtransferase (trna 2-thiouridine synthesizin protein a) | SAMEA3472044_00998 | Not Available | Positive | 1038350 - 1038595 | 9095.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





