Helicobacter fennelliae strain NCTC13102

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter fennelliae strain NCTC13102 is a single-replicon bacterium associated with the human host, Homo sapiens. Its genomic sequence is cataloged under the accession number UAWL00000000.1, which provides a reference for further studies and comparisons within the Helicobacter genus. This strain is part of the larger Helicobacter genus, known for its role in various gastrointestinal diseases, particularly in humans. Helicobacter fennelliae has been specifically noted for its potential pathogenicity, although the extent and mechanisms of its effects in human health require further investigation. The single-replicon characteristic of H. fennelliae indicates a relatively simple genomic organization compared to other bacteria that may possess multiple replicons, which can complicate their genetic regulation and adaptability. This simplicity may provide insights into the evolution and adaptability of the species within its ecological niche, particularly in relation to its human host. In summary, Helicobacter fennelliae strain NCTC13102 represents an important entity for understanding the dynamics of Helicobacter species and their interactions with human health. Its single-replicon nature and specific association with Homo sapiens underscore its potential relevance in clinical microbiology and highlight the need for ongoing research into its pathogenicity and ecological role.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter fennelliae
Strainstrain NCTC13102

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter fennelliae strain NCTC13102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter fennelliae strain NCTC13102 genome assembly, contig:

Gene Summary

Adenine Count

700304 bp

Thymine Count

712613 bp

Guanine Count

433075 bp

Cytosine Count

430854 bp

Genome Length

2276846 bp

Protein-coding Genes

2267 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC13102_02276Not AvailableNegative2239402 - 223983617228.8
lipase family proteinNCTC13102_02277Not AvailableNegative2239833 - 22400457887.79
type vi secretion protein vc_a0111 familyNCTC13102_02278Not AvailableNegative2240129 - 224103135529.2
vc_a0110 family type vi secretion proteinNCTC13102_02279Not AvailableNegative2241028 - 224275266904.6
type vi secretion system lysozyme-like proteinNCTC13102_02280Not AvailableNegative2242752 - 224314415515.7
vc_a0108 family type vi secretion proteinNCTC13102_02281Not AvailableNegative2243147 - 224460155307.1
vc_a0107 family type vi secretion proteinNCTC13102_02282Not AvailableNegative2244610 - 224509517888.0
nucleobase:cation symporterNCTC13102_02283Not AvailableNegative2245159 - 224643650691.1
type vi secretion lipoproteinNCTC13102_02284Not AvailablePositive2246540 - 224699517110.0
vc_a0114 family type vi secretion proteinNCTC13102_02285Not AvailablePositive2247012 - 224841253555.6

Displaying genes 2271 – 2280 of 2313 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.