Cedecea neteri strain NCTC12120

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea neteri strain NCTC12120 is a Gram-negative bacterium characterized by having a single replicon. This strain has been assigned the GenBank accession number UAVU00000000.1, which indicates its genomic sequence is available for further study and analysis. Cedecea species are generally known to be found in environmental sources, including water and soil, and can occasionally be associated with human infections, although specific pathogenicity details for Cedecea neteri are not provided. The single replicon trait is significant, as it suggests a potentially streamlined genomic organization, which could influence its adaptability and evolutionary dynamics within its ecological niches. Understanding the genomic characteristics of Cedecea neteri, particularly its Gram-negative classification and genomic structure, can provide insights into its metabolic capabilities and environmental interactions. Gram-negative bacteria often possess unique cell wall structures that can affect their resistance to antibiotics and their roles in various ecosystems. The availability of its genomic data can facilitate further research into its ecological role, potential applications in biotechnology, and implications in human health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea neteri
Strainstrain NCTC12120

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea neteri strain NCTC12120
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea neteri strain NCTC12120 genome assembly, contig:

Gene Summary

Adenine Count

1243706 bp

Thymine Count

1247964 bp

Guanine Count

1483714 bp

Cytosine Count

1483654 bp

Genome Length

5459038 bp

Protein-coding Genes

6872 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
purine ribonucleoside efflux pump nepiNCTC12120_03312Not AvailableNegative2480366 - 248111526206.7
type-1a pilinNCTC12120_03313Not AvailablePositive2481663 - 248225920221.6
type-1a pilinNCTC12120_03314Not AvailablePositive2482338 - 248288319726.7
chaperone protein fimc precursorNCTC12120_03315Not AvailablePositive2483151 - 248362417249.1
outer membrane usher protein fimd precursorNCTC12120_03316Not AvailablePositive2483792 - 248602382324.1
outer membrane usher protein fimd precursorNCTC12120_03317Not AvailablePositive2486001 - 24862528812.66
fimbrial-like adhesinNCTC12120_03318Not AvailablePositive2486280 - 248728435890.8
type-1a pilinNCTC12120_03319Not AvailablePositive2487295 - 248781618199.8
virulence factors putative positive transcription regulator bvgaNCTC12120_03320Not AvailableNegative2487891 - 248852323655.8
uncharacterised proteinNCTC12120_03321Not AvailableNegative2489088 - 248982828116.3

Displaying genes 3371 – 3380 of 7163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.