Cedecea neteri strain NCTC12120

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea neteri strain NCTC12120 is a Gram-negative bacterium characterized by having a single replicon. This strain has been assigned the GenBank accession number UAVU00000000.1, which indicates its genomic sequence is available for further study and analysis. Cedecea species are generally known to be found in environmental sources, including water and soil, and can occasionally be associated with human infections, although specific pathogenicity details for Cedecea neteri are not provided. The single replicon trait is significant, as it suggests a potentially streamlined genomic organization, which could influence its adaptability and evolutionary dynamics within its ecological niches. Understanding the genomic characteristics of Cedecea neteri, particularly its Gram-negative classification and genomic structure, can provide insights into its metabolic capabilities and environmental interactions. Gram-negative bacteria often possess unique cell wall structures that can affect their resistance to antibiotics and their roles in various ecosystems. The availability of its genomic data can facilitate further research into its ecological role, potential applications in biotechnology, and implications in human health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea neteri
Strainstrain NCTC12120

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea neteri strain NCTC12120
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea neteri strain NCTC12120 genome assembly, contig:

Gene Summary

Adenine Count

1243706 bp

Thymine Count

1247964 bp

Guanine Count

1483714 bp

Cytosine Count

1483654 bp

Genome Length

5459038 bp

Protein-coding Genes

6872 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uridylate kinaseNCTC12120_01180Not AvailableNegative845822 - 84654725911.8
elongation factor tsNCTC12120_01181Not AvailableNegative846695 - 84754630460.7
30s ribosomal protein s2NCTC12120_01182Not AvailableNegative847682 - 84840726718.0
methionine aminopeptidaseNCTC12120_01184Not AvailablePositive848721 - 84951529377.5
pii uridylyl-transferaseNCTC12120_01185Not AvailablePositive849971 - 85225388424.5
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseNCTC12120_01186Not AvailablePositive852351 - 85317529838.7
protein of uncharacterised function (duf3461)NCTC12120_01187Not AvailablePositive853286 - 85367515199.0
periplasmic serine endoprotease degp precursorNCTC12120_01188Not AvailableNegative853733 - 85517549676.7
deoxyguanosinetriphosphate triphosphohydrolaseNCTC12120_01189Not AvailableNegative855317 - 8555479156.01
deoxyguanosinetriphosphate triphosphohydrolaseNCTC12120_01190Not AvailableNegative855544 - 85604119465.8

Displaying genes 1321 – 1330 of 7163 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.