Capnocytophaga ochracea strain NCTC11545

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11545 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and the presence of flagella, although it is non-motile. This strain is a chemoorganotroph, deriving energy from organic compounds, and is typically found in multiple habitats, indicating its versatile ecological niche. C. ochracea is mesophilic, with an optimal growth temperature of 35°C, and it has the capacity to thrive within a specific temperature range. The bacterium exists as free-living organisms that can form chains or single cells, and it possesses a single replicon and two membranes. Its biotic relationships include associations with Homo sapiens and Metazoa, suggesting its presence in various biological environments, including those related to human health. C. ochracea is noted for its pathogenic potential in humans, although the specific mechanisms and impacts of pathogenicity are not detailed in the provided information. The strain's accession number is UAVS00000000.1, which facilitates its identification in microbial databases. The ecological insight from these traits suggests that C. ochracea may play a role in the microbial communities associated with human hosts and other metazoans. Its presence in diverse habitats and its ability to adapt to specific environmental conditions highlight its potential importance in both health and ecological systems. Understanding its behavior and interactions is crucial for further studies on its impact as a free-living organism in various ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11545

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11545
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11545 genome assembly, contig:

Gene Summary

Adenine Count

858821 bp

Thymine Count

847145 bp

Guanine Count

552586 bp

Cytosine Count

550974 bp

Genome Length

2809526 bp

Protein-coding Genes

2509 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC11545_01996Not AvailableNegative2154959 - 215612544654.4
l-asparaginase 2 precursorNCTC11545_01997Not AvailableNegative2156194 - 215725238781.1
anaerobic c4-dicarboxylate transporter dcuaNCTC11545_01998Not AvailableNegative2157309 - 215863447344.0
adp-binding proteinNCTC11545_01999Not AvailablePositive2158947 - 215941117668.0
l-ala-d/l-glu epimeraseNCTC11545_02000Not AvailablePositive2159457 - 216048238705.7
trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmcNCTC11545_02001Not AvailableNegative2160445 - 216110725313.2
branched-chain-amino-acid transaminase 1NCTC11545_02002Not AvailablePositive2161260 - 216231239452.1
Trna-argNot AvailableNot AvailablePositive2162402 - 2162478Not Available
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--ld- lysine ligaseNCTC11545_02004Not AvailableNegative2162668 - 216412854329.9
nucleotidyl transferase of uncharacterised function (duf1814)NCTC11545_02005Not AvailableNegative2164175 - 216481624644.0

Displaying genes 2001 – 2010 of 2605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.