Capnocytophaga ochracea strain NCTC11545

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea strain NCTC11545 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and the presence of flagella, although it is non-motile. This strain is a chemoorganotroph, deriving energy from organic compounds, and is typically found in multiple habitats, indicating its versatile ecological niche. C. ochracea is mesophilic, with an optimal growth temperature of 35°C, and it has the capacity to thrive within a specific temperature range. The bacterium exists as free-living organisms that can form chains or single cells, and it possesses a single replicon and two membranes. Its biotic relationships include associations with Homo sapiens and Metazoa, suggesting its presence in various biological environments, including those related to human health. C. ochracea is noted for its pathogenic potential in humans, although the specific mechanisms and impacts of pathogenicity are not detailed in the provided information. The strain's accession number is UAVS00000000.1, which facilitates its identification in microbial databases. The ecological insight from these traits suggests that C. ochracea may play a role in the microbial communities associated with human hosts and other metazoans. Its presence in diverse habitats and its ability to adapt to specific environmental conditions highlight its potential importance in both health and ecological systems. Understanding its behavior and interactions is crucial for further studies on its impact as a free-living organism in various ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
Strainstrain NCTC11545

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea strain NCTC11545
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Capnocytophaga ochracea strain NCTC11545 genome assembly, contig:

Gene Summary

Adenine Count

858821 bp

Thymine Count

847145 bp

Guanine Count

552586 bp

Cytosine Count

550974 bp

Genome Length

2809526 bp

Protein-coding Genes

2509 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal-phosphate-dependent serine hydroxymethyltransferaseNCTC11545_01986Not AvailableNegative2146564 - 214783846692.8
zinc transporter zuptNCTC11545_01987Not AvailableNegative2147941 - 214875929046.3
spermidine n(1)-acetyltransferaseNCTC11545_01988Not AvailableNegative2148768 - 214926819421.2
diaminopimelate epimeraseNCTC11545_01989Not AvailableNegative2149265 - 215005929460.7
phosphatidate cytidylyltransferaseNCTC11545_01990Not AvailableNegative2150059 - 215090131990.1
uncharacterised proteinNCTC11545_01991Not AvailableNegative2150908 - 215151023119.8
uncharacterized conserved proteinNCTC11545_01992Not AvailablePositive2152047 - 215281728930.7
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdscNCTC11545_01993Not AvailablePositive2152798 - 215331619603.9
inner membrane protein ykgbNCTC11545_01994Not AvailableNegative2153404 - 215403322751.0
l-rhamnose operon regulatory protein rhasNCTC11545_01995Not AvailableNegative2154113 - 215495232432.3

Displaying genes 1991 – 2000 of 2605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.