Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/proline symporter (proline permease) | NCTC8009_05754 | Not Available | Negative | 3737861 - 3738514 | 23629.2 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05755 | Not Available | Positive | 3738939 - 3739610 | 24488.1 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05756 | Not Available | Positive | 3739751 - 3739975 | 7805.37 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05757 | Not Available | Positive | 3739975 - 3740298 | 12419.2 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05758 | Not Available | Positive | 3740485 - 3741366 | 32554.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05759 | Not Available | Positive | 3741333 - 3742064 | 26179.5 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | NCTC8009_05760 | Not Available | Positive | 3742012 - 3742902 | 31553.7 |
| transcriptional regulator ycdc | NCTC8009_05761 | Not Available | Negative | 3742942 - 3743580 | 23703.0 |
| monooxygenase ycdm | NCTC8009_05762 | Not Available | Positive | 3743868 - 3744959 | 39917.4 |
| isochorismatase family protein ycdl | NCTC8009_05763 | Not Available | Positive | 3744956 - 3746050 | 40079.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




