Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction atp-dependent dna helicase | NCTC8009_04898 | Not Available | Negative | 3219297 - 3219776 | 17724.8 |
| protein | NCTC8009_04899 | Not Available | Positive | 3219850 - 3220653 | 30668.8 |
| holliday junction resolvase | NCTC8009_04900 | Not Available | Negative | 3220655 - 3221176 | 18747.9 |
| yebc/pmpr family dna-binding regulatory protein | NCTC8009_04901 | Not Available | Negative | 3221211 - 3221951 | 26424.0 |
| datp pyrophosphohydrolase | NCTC8009_04902 | Not Available | Negative | 3221980 - 3222489 | 19345.9 |
| aspartyl-trna synthetase | NCTC8009_04903 | Not Available | Negative | 3222550 - 3224322 | 65873.2 |
| putative isochorismatase | NCTC8009_04904 | Not Available | Positive | 3224632 - 3224844 | 7471.11 |
| putative isochorismatase | NCTC8009_04905 | Not Available | Positive | 3224783 - 3225040 | 9972.79 |
| putative isochorismatase | NCTC8009_04906 | Not Available | Positive | 3225006 - 3225200 | 6978.25 |
| conserved protein, upf0759 family | NCTC8009_04907 | Not Available | Positive | 3225197 - 3225673 | 17995.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




