Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-lee-encoded type iii secreted effector | NCTC8009_04609 | Not Available | Positive | 3040026 - 3040280 | 9492.46 |
| ankyrin | NCTC8009_04610 | Not Available | Positive | 3040766 - 3041200 | 16182.0 |
| ankyrin | NCTC8009_04611 | Not Available | Positive | 3041197 - 3041367 | 6420.77 |
| putative transmembrane anchor protein | NCTC8009_04612 | Not Available | Positive | 3041619 - 3041726 | 4115.44 |
| putative outer membrane protein, acid-inducible | NCTC8009_04613 | Not Available | Negative | 3042212 - 3042535 | 11147.0 |
| 6-phosphofructokinase | NCTC8009_04614 | Not Available | Positive | 3042822 - 3043715 | 31238.4 |
| protein | NCTC8009_04615 | Not Available | Positive | 3043853 - 3044143 | 10865.6 |
| putative kinase | NCTC8009_04616 | Not Available | Positive | 3044249 - 3045109 | 32476.3 |
| inner membrane protein | NCTC8009_04617 | Not Available | Negative | 3045150 - 3045446 | 11179.0 |
| inner membrane protein | NCTC8009_04618 | Not Available | Negative | 3045547 - 3045687 | 5327.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




