Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | NCTC8009_04483 | Not Available | Negative | 2953819 - 2954319 | 19580.5 |
| pyridoxamine 5'-phosphate oxidase | NCTC8009_04484 | Not Available | Negative | 2954345 - 2954476 | 5083.03 |
| putative lipoprotein | NCTC8009_04485 | Not Available | Negative | 2954535 - 2954858 | 12276.9 |
| anhydro-n-acetylmuramic acid kinase | NCTC8009_04486 | Not Available | Negative | 2954969 - 2956072 | 39373.5 |
| outer membrane lipoprotein | NCTC8009_04487 | Not Available | Positive | 2956373 - 2956636 | 8379.92 |
| outer membrane lipoprotein | NCTC8009_04488 | Not Available | Positive | 2956581 - 2956793 | 7838.5 |
| transcriptional regulator slya | NCTC8009_04489 | Not Available | Negative | 2956852 - 2957292 | 16553.3 |
| inner membrane protein | NCTC8009_04490 | Not Available | Positive | 2957493 - 2957729 | 8891.33 |
| uncharacterised protein | NCTC8009_04491 | Not Available | Negative | 2957815 - 2958060 | 9317.49 |
| hlyd-family secretion protein | NCTC8009_04492 | Not Available | Positive | 2958121 - 2958465 | 12823.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




