Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite extrusion protein 2 | NCTC8009_04251 | Not Available | Negative | 2792269 - 2792973 | 25742.7 |
| glycoprotein with ribonuclease inhibitor domain (yddk) (modular protein) | NCTC8009_04252 | Not Available | Negative | 2793530 - 2794405 | 33266.7 |
| outer membrane porin | NCTC8009_04253 | Not Available | Negative | 2794652 - 2794942 | 10722.6 |
| inner membrane protein | NCTC8009_04254 | Not Available | Negative | 2795201 - 2795860 | 23958.6 |
| inner membrane protein | NCTC8009_04255 | Not Available | Negative | 2795802 - 2796026 | 7661.55 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | NCTC8009_04257 | Not Available | Positive | 2799376 - 2800260 | 32240.4 |
| formate dehydrogenase-n subunit gamma | NCTC8009_04258 | Not Available | Positive | 2800253 - 2800906 | 25384.0 |
| putative plasmid maintenance protein | NCTC8009_04259 | Not Available | Negative | 2800957 - 2801241 | 10401.7 |
| alcohol dehydrogenase | NCTC8009_04260 | Not Available | Negative | 2801388 - 2802398 | 35371.6 |
| malate dehydrogenase | NCTC8009_04261 | Not Available | Negative | 2802532 - 2803197 | 24353.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




