Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | NCTC8009_03742 | Not Available | Positive | 2476593 - 2477138 | 20572.7 |
| d-amino acid dehydrogenase small subunit | NCTC8009_03743 | Not Available | Positive | 2477114 - 2477890 | 28247.9 |
| alanine racemase, catabolic | NCTC8009_03744 | Not Available | Positive | 2477900 - 2478970 | 38872.9 |
| uncharacterised protein | NCTC8009_03745 | Not Available | Positive | 2479073 - 2479222 | 5554.69 |
| cell volume regulation protein a | NCTC8009_03746 | Not Available | Negative | 2479355 - 2480248 | 32884.4 |
| cell volume regulation protein a | NCTC8009_03747 | Not Available | Negative | 2480319 - 2480459 | 4692.06 |
| cell volume regulation protein a | NCTC8009_03748 | Not Available | Negative | 2480456 - 2481091 | 21984.4 |
| muramoyltetrapeptide carboxypeptidase | NCTC8009_03749 | Not Available | Negative | 2481186 - 2482100 | 33628.6 |
| membrane-bound lytic murein transglycosylase e | NCTC8009_03750 | Not Available | Positive | 2482200 - 2482811 | 22213.7 |
| protein involved in flagellar function | NCTC8009_03751 | Not Available | Negative | 2482813 - 2483265 | 17415.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




