Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NCTC8009_03588 | Not Available | Positive | 2384469 - 2385626 | 41146.2 |
| cupin superfamily protein family | NCTC8009_03692 | Not Available | Negative | 2441300 - 2442289 | 37342.9 |
| two-component sensor kinase | NCTC8009_03693 | Not Available | Negative | 2442496 - 2443956 | 55336.8 |
| two-component response regulator | NCTC8009_03694 | Not Available | Negative | 2443956 - 2444627 | 25536.7 |
| adenylosuccinate lyase | NCTC8009_03695 | Not Available | Negative | 2444794 - 2446164 | 51572.7 |
| putative lysogenization regulator | NCTC8009_03696 | Not Available | Negative | 2446236 - 2446595 | 12771.5 |
| putative lysogenization regulator | NCTC8009_03697 | Not Available | Negative | 2446636 - 2446809 | 6256.47 |
| pp_03585 | NCTC8009_03698 | Not Available | Negative | 2446845 - 2447951 | Not Available |
| putative nudix-family hydrolase | NCTC8009_03699 | Not Available | Negative | 2448005 - 2448466 | 17433.8 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | NCTC8009_03700 | Not Available | Negative | 2448476 - 2448871 | 14830.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




