Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translocon espa | NCTC8009_02064 | Not Available | Positive | 1358626 - 1358928 | 10801.7 |
| translocon espd | NCTC8009_02065 | Not Available | Positive | 1359077 - 1360219 | 39621.0 |
| translocon espb | NCTC8009_02066 | Not Available | Positive | 1360240 - 1361184 | 33200.9 |
| chaperone cesd2 | NCTC8009_02067 | Not Available | Positive | 1361191 - 1361598 | 15762.7 |
| t3ss structure protein escf | NCTC8009_02068 | Not Available | Positive | 1361635 - 1361856 | 8127.69 |
| t3ss component | NCTC8009_02069 | Not Available | Positive | 1361862 - 1362140 | 10453.7 |
| t3ss effector espf | NCTC8009_02070 | Not Available | Positive | 1362356 - 1362979 | 21193.0 |
| t3ss effector espm | NCTC8009_02071 | Not Available | Negative | 1363337 - 1363879 | 20610.8 |
| t3ss effector nleg | NCTC8009_02072 | Not Available | Positive | 1364078 - 1364716 | 23952.7 |
| aec78 | NCTC8009_02073 | Not Available | Negative | 1365090 - 1365434 | 12467.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




