Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion switching protein sepd | NCTC8009_02034 | Not Available | Negative | 1340887 - 1341342 | 17417.7 |
| t3ss structure protein escj | NCTC8009_02035 | Not Available | Negative | 1341702 - 1341920 | 8223.06 |
| t3ss component | NCTC8009_02036 | Not Available | Negative | 1341922 - 1342350 | 15396.4 |
| t3ss effector espz | NCTC8009_02037 | Not Available | Negative | 1342384 - 1342629 | 8112.0 |
| regulator mpc | NCTC8009_02038 | Not Available | Positive | 1342871 - 1343224 | 13910.8 |
| translocator escv | NCTC8009_02039 | Not Available | Positive | 1343221 - 1344216 | 35996.4 |
| translocator escv | NCTC8009_02040 | Not Available | Positive | 1344227 - 1345249 | 38784.7 |
| translocator escn | NCTC8009_02041 | Not Available | Positive | 1345233 - 1345586 | 13220.1 |
| translocator escn | NCTC8009_02042 | Not Available | Positive | 1345595 - 1345954 | 13114.9 |
| translocator escn | NCTC8009_02043 | Not Available | Positive | 1345951 - 1346139 | 6992.36 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




