Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative permease | NCTC8009_02014 | Not Available | Positive | 1325920 - 1326777 | 31905.3 |
| transposase | NCTC8009_02015 | Not Available | Positive | 1326824 - 1327123 | 11543.8 |
| is3 element transposase | NCTC8009_02016 | Not Available | Positive | 1327127 - 1327987 | 32894.2 |
| t3ss effector ospb | NCTC8009_02017 | Not Available | Negative | 1328053 - 1328337 | 10326.4 |
| t3ss component | NCTC8009_02018 | Not Available | Negative | 1328664 - 1329482 | 31065.7 |
| t3ss effector espg | NCTC8009_02019 | Not Available | Negative | 1329629 - 1330774 | 42340.5 |
| transcription regulator ler | NCTC8009_02020 | Not Available | Positive | 1332087 - 1332458 | 14475.2 |
| t3ss component | NCTC8009_02021 | Not Available | Positive | 1332473 - 1332691 | 8419.37 |
| t3ss structure protein escr | NCTC8009_02022 | Not Available | Positive | 1334262 - 1334738 | 17826.3 |
| escs | NCTC8009_02023 | Not Available | Positive | 1334914 - 1335159 | 9056.38 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




