Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1441722 bp
Thymine Count
1450912 bp
Guanine Count
1462488 bp
Cytosine Count
1493697 bp
Genome Length
5848819 bp
Protein-coding Genes
7258 genes
Non-Coding Genes
1490 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in utilization of dna as a carbon source | NCTC8009_01408 | Not Available | Positive | 922929 - 923222 | 11351.9 |
| outer membrane porin hofq | NCTC8009_01409 | Not Available | Positive | 923693 - 924931 | 44776.9 |
| shikimate kinase i | NCTC8009_01410 | Not Available | Positive | 925176 - 925853 | 25299.1 |
| 3-dehydroquinate synthase | NCTC8009_01411 | Not Available | Positive | 925910 - 926998 | 38856.3 |
| damx protein | NCTC8009_01412 | Not Available | Positive | 927090 - 927692 | 22339.8 |
| damx protein | NCTC8009_01413 | Not Available | Positive | 927677 - 928375 | 24464.6 |
| dna adenine methylase | NCTC8009_01414 | Not Available | Positive | 928482 - 929318 | 32101.2 |
| ribulose-phosphate 3-epimerase | NCTC8009_01415 | Not Available | Positive | 929336 - 930013 | 24555.7 |
| phosphoglycolate phosphatase | NCTC8009_01416 | Not Available | Positive | 930095 - 930382 | 10782.0 |
| phosphoglycolate phosphatase | NCTC8009_01417 | Not Available | Positive | 930470 - 930763 | 10551.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




